Load model configuration to the aeme object

Usage

load_configuration(
  aeme,
  model,
  path = ".",
  model_controls = NULL,
  use_bgc = FALSE,
  ext_elev = 0,
  calc_wbal = TRUE,
  wb_method = 2,
  calc_wlev = TRUE,
  use_aeme = FALSE,
  coeffs = NULL,
  hum_type = 3,
  est_swr_hr = TRUE
)

Arguments

aeme

Aeme object.

model

character vector; models to use. One or more of "dy_cd", "glm_aed", "gotm_wet", "simstrat_aed2". Defaults to all models if not found in aeme.

path

character; directory where input files are located. Defaults to the path stored in aeme, or the current working directory if not set.

model_controls

data.frame; model configuration, typically loaded via get_model_controls().

use_bgc

logical; enable the biogeochemical model. Default: FALSE.

ext_elev

numeric; elevation (m) to extend the hypsograph to. Default: 0.

calc_wbal

logical; calculate water balance. Default: TRUE.

wb_method

integer; water balance method. One of:

1 — no inflows or outflows
2 — outflows calculated (default)
3 — unexplained storage changes treated as effective inflows/outflows

calc_wlev

logical; calculate water level. Default: TRUE.

use_aeme

logical; use the aeme object to generate model configuration files. Default: FALSE.

coeffs

numeric vector of length 2; coefficients for estimating surface water temperature when calculating evaporation. If water temperature observations are present in aeme, a linear model is fitted against air temperature. Otherwise defaults to \(T_{water} = 5 + 0.75 \times T_{air}\) (Stefan & Preud'homme, 1993, doi:10.1111/j.1752-1688.1993.tb01502.x ).

hum_type

integer; humidity input type for GOTM. One of:

1 — relative humidity (%)
2 — wet-bulb temperature
3 — dew point temperature (default)
4 — specific humidity (kg/kg)

est_swr_hr

logical; estimate hourly shortwave radiation from daily values. Default: TRUE.

Value

Updated aeme object with model configuration