Run AEME with parameter dataframe

Usage

run_aeme_param(
  aeme,
  param,
  model,
  path = ".",
  model_controls = NULL,
  na_value = 999,
  return_nc = FALSE,
  return_aeme = FALSE,
  parallel = FALSE,
  verbose = FALSE,
  timeout = Inf
)

Arguments

aeme: Aeme object.
param: dataframe; of parameters read in from a csv file. Requires the columns c("model", "file", "name", "value", "min", "max", "log")
model: character vector; models to use. One or more of "dy_cd", "glm_aed", "gotm_wet". Defaults to all models if not found in aeme.
path: character; directory where input files are located. Defaults to the path stored in aeme, or the current working directory if not set.
model_controls: data.frame; model configuration, typically loaded via get_model_controls().
na_value: numeric; value to return if model run is unsuccessful
return_nc: boolean; return netCDF file connection
return_aeme: boolean; return AEME object
parallel: logical; run models in parallel. Defaults to FALSE.
verbose: logical; print model output to console. Defaults to FALSE.
timeout: Timeout for the process, in seconds, or as a difftime object. If it is not finished before this, it will be killed.

Value

na_value if model run is unsuccessful