Create control list for calibration

Usage

create_calib_control(
  file_type = "db",
  file_name = NULL,
  file_dir = "calib_sa",
  na_value = 999,
  parallel = TRUE,
  ncore = parallel::detectCores() - 1,
  timeout = Inf,
  VTR = -Inf,
  NP = NA,
  itermax = 200,
  reltol = 0.07,
  cutoff = 0.25,
  mutate = 0.1,
  c_method = "CMAES",
  ...
)

Arguments

file_type: Character. Output type: "csv" or "db". Default "db".
file_name: Character. Output file name. Defaults to "results.db" (db) or "simulation_metadata.csv" (csv).
file_dir: Character. Output directory. Default "calib_sa".
na_value: Numeric. Penalty value substituted for NA fit values during optimisation to discourage parameter sets that produce invalid model output. Default 999.
parallel: Logical. Run in parallel? Default TRUE.
ncore: Integer. Number of cores if parallel = TRUE. Default parallel::detectCores() - 1.
timeout: Numeric. Max runtime in seconds. Default Inf.
VTR: Numeric. Target objective value. Default -Inf.
NP: Integer. Population size. Default NA.
itermax: Integer. Maximum iterations. Default 200.
reltol: Numeric. Relative convergence tolerance. Default 0.07.
cutoff: Numeric. Quantile cutoff (0–1).
mutate: Numeric. Fraction of population to mutate (0–1).
c_method: Character. "CMAES" or "LHC". Default "CMAES".
...: Must be empty. Additional arguments are not allowed.

Value

A control list.