Example dataframe used for calibrating the biogeochemistry in the GLM-AED model.
Source:R/data.R
glm_aed_parameters.RdAll the parameters within the AED.nml file. This includes three phytoplankton groups (greens, cyanobacteria an diatoms), one zooplankton group (cladocerans). This has the values in the default file and 25 % parameter ranges for sensitivity analysis.
Format
glm_aed_parameters
A data frame with 253 rows and 7 columns:
- model
Model for the parameter
- file
File in which the parameter is stored
- name
Name of the parameter
- value
Value of the parameter
- min
Minimum range of the parameter
- max
Maximum range of the parameter
- group
Phytoplankton Group for the parameter, only applies to phytoplankton parameters
- index
Index for the parameter in the model file, only used for parameters that have multiple values in a vector such as "sediment/sed_temp_mean" in GLM-AED
- module
Module for the parameter in the model, useful to help identify parameters
- par
Short name for the parameter
- logical
Logical value if the parameter is boolean
- logical_val
Value if the parameter is boolean
- char
Logical value if the parameter is character
- char_val
Value if the parameter is character